Explore systems

Browse curated peptide and protein systems by sequence, PDB ID, modification type, and protonation-state annotation.

Showing 150 of 442

Search supports sequence or PDB ID. Use [PTM] after an amino acid for modified residues, e.g. AR[CBM]A. Use * after a protonated residue for CpHMD, e.g. AH*H*A. Current Type / PTM / CpHMD filters will be kept.

Due to the accuracy limits of implicit solvent models, we only simulated the first chain of the protein corresponding to each PDB ID.

Class
PTM
CpHMD
SystemLengthModificationpH ConditionMethodsStructure
ACA3
UnbiasedAdaptive
ACA structure
View
AACA4
UnbiasedAdaptive
AACA structure
View
ACAA4
UnbiasedAdaptive
ACAA structure
View
ACCA4
UnbiasedAdaptive
ACCA structure
View
ACDA4
UnbiasedAdaptive
ACDA structure
View
ACEA4
UnbiasedAdaptive
ACEA structure
View
ACFA4
UnbiasedAdaptive
ACFA structure
View
ACGA4
UnbiasedAdaptive
ACGA structure
View
ACHA4
UnbiasedAdaptive
ACHA structure
View
ACIA4
UnbiasedAdaptive
ACIA structure
View
ACKA4
UnbiasedAdaptive
ACKA structure
View
ACLA4
UnbiasedAdaptive
ACLA structure
View
ACMA4
UnbiasedAdaptive
ACMA structure
View
ACNA4
UnbiasedAdaptive
ACNA structure
View
ACPA4
UnbiasedAdaptive
ACPA structure
View
ACQA4
UnbiasedAdaptive
ACQA structure
View
ACRA4
UnbiasedAdaptive
ACRA structure
View
ACSA4
UnbiasedAdaptive
ACSA structure
View
ACTA4
UnbiasedAdaptive
ACTA structure
View
ACVA4
UnbiasedAdaptive
ACVA structure
View
ACWA4
UnbiasedAdaptive
ACWA structure
View
ACYA4
UnbiasedAdaptive
ACYA structure
View
ADCA4
UnbiasedAdaptive
ADCA structure
View
AECA4
UnbiasedAdaptive
AECA structure
View
AFCA4
UnbiasedAdaptive
AFCA structure
View
AGCA4
UnbiasedAdaptive
AGCA structure
View
AHCA4
UnbiasedAdaptive
AHCA structure
View
AICA4
UnbiasedAdaptive
AICA structure
View
AKCA4
UnbiasedAdaptive
AKCA structure
View
ALCA4
UnbiasedAdaptive
ALCA structure
View
AMCA4
UnbiasedAdaptive
AMCA structure
View
ANCA4
UnbiasedAdaptive
ANCA structure
View
APCA4
UnbiasedAdaptive
APCA structure
View
AQCA4
UnbiasedAdaptive
AQCA structure
View
ARCA4
UnbiasedAdaptive
ARCA structure
View
ASCA4
UnbiasedAdaptive
ASCA structure
View
ATCA4
UnbiasedAdaptive
ATCA structure
View
AVCA4
UnbiasedAdaptive
AVCA structure
View
AWCA4
UnbiasedAdaptive
AWCA structure
View
AYCA4
UnbiasedAdaptive
AYCA structure
View
4C2M44
0.0–12.5
UnbiasedCpHMD
4C2M structure
View
3HTK60
0.0–12.5
UnbiasedCpHMD
3HTK structure
View
4I1L62
0.0–12.5
UnbiasedCpHMD
4I1L structure
View
3S2R64
0.0–12.5
UnbiasedCpHMD
3S2R structure
View
4K1264
0.0–12.5
UnbiasedCpHMD
4K12 structure
View
2Y9U67
0.0–12.5
UnbiasedCpHMD
2Y9U structure
View
1KW470
0.0–12.5
UnbiasedCpHMD
1KW4 structure
View
3NY370
0.0–12.5
UnbiasedCpHMD
3NY3 structure
View
2VQC70
0.0–12.5
UnbiasedCpHMD
2VQC structure
View
2BYK72
0.0–12.5
UnbiasedCpHMD
2BYK structure
View