Explore systems

Browse curated peptide and protein systems by sequence, PDB ID, modification type, and protonation-state annotation.

Showing 150 of 586

Search supports sequence or PDB ID. Use [PTM] after an amino acid for modified residues, e.g. AR[CBM]A. Use * after a protonated residue for CpHMD, e.g. AH*H*A. Current Type / PTM / CpHMD filters will be kept.

Due to the accuracy limits of implicit solvent models, we only simulated the first chain of the protein corresponding to each PDB ID.

Class
PTM
CpHMD
SystemLengthModificationpH ConditionMethodsStructure
AIA3
UnbiasedAdaptive
AIA structure
View
AAIA4
UnbiasedAdaptive
AAIA structure
View
ACIA4
UnbiasedAdaptive
ACIA structure
View
ADIA4
UnbiasedAdaptive
ADIA structure
View
AEIA4
UnbiasedAdaptive
AEIA structure
View
AFIA4
UnbiasedAdaptive
AFIA structure
View
AGIA4
UnbiasedAdaptive
AGIA structure
View
AHIA4
UnbiasedAdaptive
AHIA structure
View
AIAA4
UnbiasedAdaptive
AIAA structure
View
AICA4
UnbiasedAdaptive
AICA structure
View
AIDA4
UnbiasedAdaptive
AIDA structure
View
AIEA4
UnbiasedAdaptive
AIEA structure
View
AIFA4
UnbiasedAdaptive
AIFA structure
View
AIGA4
UnbiasedAdaptive
AIGA structure
View
AIHA4
UnbiasedAdaptive
AIHA structure
View
AIIA4
UnbiasedAdaptive
AIIA structure
View
AIKA4
UnbiasedAdaptive
AIKA structure
View
AILA4
UnbiasedAdaptive
AILA structure
View
AIMA4
UnbiasedAdaptive
AIMA structure
View
AINA4
UnbiasedAdaptive
AINA structure
View
AIPA4
UnbiasedAdaptive
AIPA structure
View
AIQA4
UnbiasedAdaptive
AIQA structure
View
AIRA4
UnbiasedAdaptive
AIRA structure
View
AISA4
UnbiasedAdaptive
AISA structure
View
AITA4
UnbiasedAdaptive
AITA structure
View
AIVA4
UnbiasedAdaptive
AIVA structure
View
AIWA4
UnbiasedAdaptive
AIWA structure
View
AIYA4
UnbiasedAdaptive
AIYA structure
View
AKIA4
UnbiasedAdaptive
AKIA structure
View
ALIA4
UnbiasedAdaptive
ALIA structure
View
AMIA4
UnbiasedAdaptive
AMIA structure
View
ANIA4
UnbiasedAdaptive
ANIA structure
View
APIA4
UnbiasedAdaptive
APIA structure
View
AQIA4
UnbiasedAdaptive
AQIA structure
View
ARIA4
UnbiasedAdaptive
ARIA structure
View
ASIA4
UnbiasedAdaptive
ASIA structure
View
ATIA4
UnbiasedAdaptive
ATIA structure
View
AVIA4
UnbiasedAdaptive
AVIA structure
View
AWIA4
UnbiasedAdaptive
AWIA structure
View
AYIA4
UnbiasedAdaptive
AYIA structure
View
1AW824
0.0–12.5
UnbiasedCpHMD
1AW8 structure
View
4N3Y35
0.0–12.5
UnbiasedCpHMD
4N3Y structure
View
4C2M44
0.0–12.5
UnbiasedCpHMD
4C2M structure
View
1OJH52
0.0–12.5
UnbiasedCpHMD
1OJH structure
View
2P5854
0.0–12.5
UnbiasedCpHMD
2P58 structure
View
3HTK60
0.0–12.5
UnbiasedCpHMD
3HTK structure
View
3DGP62
0.0–12.5
UnbiasedCpHMD
3DGP structure
View
4F9862
0.0–12.5
UnbiasedCpHMD
4F98 structure
View
2OXL62
0.0–12.5
UnbiasedCpHMD
2OXL structure
View
3ZDO63
0.0–12.5
UnbiasedCpHMD
3ZDO structure
View