Explore systems

Browse curated peptide and protein systems by sequence, PDB ID, modification type, and protonation-state annotation.

Showing 201250 of 1015

Search supports sequence or PDB ID. Use [PTM] after an amino acid for modified residues, e.g. AR[CBM]A. Use * after a protonated residue for CpHMD, e.g. AH*H*A. Current Type / PTM / CpHMD filters will be kept.

Due to the accuracy limits of implicit solvent models, we only simulated the first chain of the protein corresponding to each PDB ID.

Class
PTM
CpHMD
SystemLengthModificationpH ConditionMethodsStructure
AIFA4
UnbiasedAdaptive
AIFA structure
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AIGA4
UnbiasedAdaptive
AIGA structure
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AIHA4
UnbiasedAdaptive
AIHA structure
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AIIA4
UnbiasedAdaptive
AIIA structure
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AIKA4
UnbiasedAdaptive
AIKA structure
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AILA4
UnbiasedAdaptive
AILA structure
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AIMA4
UnbiasedAdaptive
AIMA structure
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AINA4
UnbiasedAdaptive
AINA structure
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AIPA4
UnbiasedAdaptive
AIPA structure
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AIQA4
UnbiasedAdaptive
AIQA structure
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AIRA4
UnbiasedAdaptive
AIRA structure
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AISA4
UnbiasedAdaptive
AISA structure
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AITA4
UnbiasedAdaptive
AITA structure
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AIVA4
UnbiasedAdaptive
AIVA structure
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AIWA4
UnbiasedAdaptive
AIWA structure
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AIYA4
UnbiasedAdaptive
AIYA structure
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AKAA4
UnbiasedAdaptive
AKAA structure
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AKCA4
UnbiasedAdaptive
AKCA structure
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AKDA4
UnbiasedAdaptive
AKDA structure
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AK*D*A4
7.0
UnbiasedAdaptiveCpHMD
AK_C7_D_C7_A structure
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AKEA4
UnbiasedAdaptive
AKEA structure
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AK*E*A4
7.0
UnbiasedAdaptiveCpHMD
AK_C7_E_C7_A structure
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AKFA4
UnbiasedAdaptive
AKFA structure
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AKGA4
UnbiasedAdaptive
AKGA structure
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AKHA4
UnbiasedAdaptive
AKHA structure
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AK*H*A4
7.0
UnbiasedAdaptiveCpHMD
AK_C7_H_C7_A structure
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AKIA4
UnbiasedAdaptive
AKIA structure
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AKKA4
UnbiasedAdaptive
AKKA structure
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AK*K*A4
7.0
UnbiasedAdaptiveCpHMD
AK_C7_K_C7_A structure
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AKLA4
UnbiasedAdaptive
AKLA structure
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AKMA4
UnbiasedAdaptive
AKMA structure
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AKNA4
UnbiasedAdaptive
AKNA structure
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AKPA4
UnbiasedAdaptive
AKPA structure
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AKQA4
UnbiasedAdaptive
AKQA structure
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AKRA4
UnbiasedAdaptive
AKRA structure
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AK*R*A4
7.0
UnbiasedAdaptiveCpHMD
AK_C7_R_C7_A structure
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AKSA4
UnbiasedAdaptive
AKSA structure
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AKTA4
UnbiasedAdaptive
AKTA structure
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AKVA4
UnbiasedAdaptive
AKVA structure
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AKWA4
UnbiasedAdaptive
AKWA structure
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AKYA4
UnbiasedAdaptive
AKYA structure
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ALAA4
UnbiasedAdaptive
ALAA structure
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ALCA4
UnbiasedAdaptive
ALCA structure
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ALDA4
UnbiasedAdaptive
ALDA structure
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ALEA4
UnbiasedAdaptive
ALEA structure
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ALFA4
UnbiasedAdaptive
ALFA structure
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ALGA4
UnbiasedAdaptive
ALGA structure
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ALHA4
UnbiasedAdaptive
ALHA structure
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ALIA4
UnbiasedAdaptive
ALIA structure
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ALKA4
UnbiasedAdaptive
ALKA structure
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