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Browse curated peptide and protein systems by sequence, PDB ID, modification type, and protonation-state annotation.

Showing 301350 of 1013

Search supports sequence or PDB ID. Use [PTM] after an amino acid for modified residues, e.g. AR[CBM]A. Use * after a protonated residue for CpHMD, e.g. AH*H*A. Current Type / PTM / CpHMD filters will be kept.

Due to the accuracy limits of implicit solvent models, we only simulated the first chain of the protein corresponding to each PDB ID.

Class
PTM
CpHMD
SystemLengthModificationpH ConditionMethodsStructure
ANYA4
UnbiasedAdaptive
ANYA structure
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APAA4
UnbiasedAdaptive
APAA structure
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APCA4
UnbiasedAdaptive
APCA structure
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APDA4
UnbiasedAdaptive
APDA structure
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APEA4
UnbiasedAdaptive
APEA structure
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APFA4
UnbiasedAdaptive
APFA structure
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APGA4
UnbiasedAdaptive
APGA structure
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APHA4
UnbiasedAdaptive
APHA structure
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APIA4
UnbiasedAdaptive
APIA structure
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APKA4
UnbiasedAdaptive
APKA structure
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APLA4
UnbiasedAdaptive
APLA structure
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APMA4
UnbiasedAdaptive
APMA structure
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APNA4
UnbiasedAdaptive
APNA structure
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APPA4
UnbiasedAdaptive
APPA structure
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APQA4
UnbiasedAdaptive
APQA structure
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APRA4
UnbiasedAdaptive
APRA structure
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APSA4
UnbiasedAdaptive
APSA structure
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APTA4
UnbiasedAdaptive
APTA structure
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APVA4
UnbiasedAdaptive
APVA structure
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APWA4
UnbiasedAdaptive
APWA structure
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APYA4
UnbiasedAdaptive
APYA structure
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AQAA4
UnbiasedAdaptive
AQAA structure
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AQCA4
UnbiasedAdaptive
AQCA structure
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AQDA4
UnbiasedAdaptive
AQDA structure
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AQEA4
UnbiasedAdaptive
AQEA structure
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AQFA4
UnbiasedAdaptive
AQFA structure
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AQGA4
UnbiasedAdaptive
AQGA structure
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AQHA4
UnbiasedAdaptive
AQHA structure
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AQIA4
UnbiasedAdaptive
AQIA structure
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AQKA4
UnbiasedAdaptive
AQKA structure
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AQLA4
UnbiasedAdaptive
AQLA structure
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AQMA4
UnbiasedAdaptive
AQMA structure
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AQNA4
UnbiasedAdaptive
AQNA structure
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AQPA4
UnbiasedAdaptive
AQPA structure
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AQQA4
UnbiasedAdaptive
AQQA structure
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AQRA4
UnbiasedAdaptive
AQRA structure
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AQSA4
UnbiasedAdaptive
AQSA structure
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AQTA4
UnbiasedAdaptive
AQTA structure
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AQVA4
UnbiasedAdaptive
AQVA structure
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AQWA4
UnbiasedAdaptive
AQWA structure
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AQYA4
UnbiasedAdaptive
AQYA structure
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ARAA4
UnbiasedAdaptive
ARAA structure
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ARCA4
UnbiasedAdaptive
ARCA structure
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ARDA4
UnbiasedAdaptive
ARDA structure
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AR*D*A4
7.0
UnbiasedAdaptiveCpHMD
AR_C7_D_C7_A structure
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AREA4
UnbiasedAdaptive
AREA structure
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AR*E*A4
7.0
UnbiasedAdaptiveCpHMD
AR_C7_E_C7_A structure
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ARFA4
UnbiasedAdaptive
ARFA structure
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ARGA4
UnbiasedAdaptive
ARGA structure
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ARHA4
UnbiasedAdaptive
ARHA structure
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