Explore systems

Browse curated peptide and protein systems by sequence, PDB ID, modification type, and protonation-state annotation.

Showing 351400 of 1015

Search supports sequence or PDB ID. Use [PTM] after an amino acid for modified residues, e.g. AR[CBM]A. Use * after a protonated residue for CpHMD, e.g. AH*H*A. Current Type / PTM / CpHMD filters will be kept.

Due to the accuracy limits of implicit solvent models, we only simulated the first chain of the protein corresponding to each PDB ID.

Class
PTM
CpHMD
SystemLengthModificationpH ConditionMethodsStructure
AR*H*A4
7.0
UnbiasedAdaptiveCpHMD
AR_C7_H_C7_A structure
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ARIA4
UnbiasedAdaptive
ARIA structure
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ARKA4
UnbiasedAdaptive
ARKA structure
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AR*K*A4
7.0
UnbiasedAdaptiveCpHMD
AR_C7_K_C7_A structure
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ARLA4
UnbiasedAdaptive
ARLA structure
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ARMA4
UnbiasedAdaptive
ARMA structure
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ARNA4
UnbiasedAdaptive
ARNA structure
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ARPA4
UnbiasedAdaptive
ARPA structure
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ARQA4
UnbiasedAdaptive
ARQA structure
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ARRA4
UnbiasedAdaptive
ARRA structure
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AR*R*A4
7.0
UnbiasedAdaptiveCpHMD
AR_C7_R_C7_A structure
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ARSA4
UnbiasedAdaptive
ARSA structure
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ARTA4
UnbiasedAdaptive
ARTA structure
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ARVA4
UnbiasedAdaptive
ARVA structure
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ARWA4
UnbiasedAdaptive
ARWA structure
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ARYA4
UnbiasedAdaptive
ARYA structure
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ASAA4
UnbiasedAdaptive
ASAA structure
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ASCA4
UnbiasedAdaptive
ASCA structure
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ASDA4
UnbiasedAdaptive
ASDA structure
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ASEA4
UnbiasedAdaptive
ASEA structure
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ASFA4
UnbiasedAdaptive
ASFA structure
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ASGA4
UnbiasedAdaptive
ASGA structure
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ASHA4
UnbiasedAdaptive
ASHA structure
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ASIA4
UnbiasedAdaptive
ASIA structure
View
ASKA4
UnbiasedAdaptive
ASKA structure
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ASLA4
UnbiasedAdaptive
ASLA structure
View
ASMA4
UnbiasedAdaptive
ASMA structure
View
ASNA4
UnbiasedAdaptive
ASNA structure
View
ASPA4
UnbiasedAdaptive
ASPA structure
View
ASQA4
UnbiasedAdaptive
ASQA structure
View
ASRA4
UnbiasedAdaptive
ASRA structure
View
ASSA4
UnbiasedAdaptive
ASSA structure
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ASTA4
UnbiasedAdaptive
ASTA structure
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ASVA4
UnbiasedAdaptive
ASVA structure
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ASWA4
UnbiasedAdaptive
ASWA structure
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ASYA4
UnbiasedAdaptive
ASYA structure
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ATAA4
UnbiasedAdaptive
ATAA structure
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ATCA4
UnbiasedAdaptive
ATCA structure
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ATDA4
UnbiasedAdaptive
ATDA structure
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ATEA4
UnbiasedAdaptive
ATEA structure
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ATFA4
UnbiasedAdaptive
ATFA structure
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ATGA4
UnbiasedAdaptive
ATGA structure
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ATHA4
UnbiasedAdaptive
ATHA structure
View
ATIA4
UnbiasedAdaptive
ATIA structure
View
ATKA4
UnbiasedAdaptive
ATKA structure
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ATLA4
UnbiasedAdaptive
ATLA structure
View
ATMA4
UnbiasedAdaptive
ATMA structure
View
ATNA4
UnbiasedAdaptive
ATNA structure
View
ATPA4
UnbiasedAdaptive
ATPA structure
View
ATQA4
UnbiasedAdaptive
ATQA structure
View