Explore systems

Browse curated peptide and protein systems by sequence, PDB ID, modification type, and protonation-state annotation.

Showing 150 of 568

Search supports sequence or PDB ID. Use [PTM] after an amino acid for modified residues, e.g. AR[CBM]A. Use * after a protonated residue for CpHMD, e.g. AH*H*A. Current Type / PTM / CpHMD filters will be kept.

Due to the accuracy limits of implicit solvent models, we only simulated the first chain of the protein corresponding to each PDB ID.

Class
PTM
CpHMD
SystemLengthModificationpH ConditionMethodsStructure
AHA3
UnbiasedAdaptive
AHA structure
View
AH*A3
7.0
UnbiasedAdaptiveCpHMD
AH_C7_A structure
View
AAHA4
UnbiasedAdaptive
AAHA structure
View
ACHA4
UnbiasedAdaptive
ACHA structure
View
ADHA4
UnbiasedAdaptive
ADHA structure
View
AD*H*A4
7.0
UnbiasedAdaptiveCpHMD
AD_C7_H_C7_A structure
View
AEHA4
UnbiasedAdaptive
AEHA structure
View
AE*H*A4
7.0
UnbiasedAdaptiveCpHMD
AE_C7_H_C7_A structure
View
AFHA4
UnbiasedAdaptive
AFHA structure
View
AGHA4
UnbiasedAdaptive
AGHA structure
View
AHAA4
UnbiasedAdaptive
AHAA structure
View
AHCA4
UnbiasedAdaptive
AHCA structure
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AHDA4
UnbiasedAdaptive
AHDA structure
View
AH*D*A4
7.0
UnbiasedAdaptiveCpHMD
AH_C7_D_C7_A structure
View
AHEA4
UnbiasedAdaptive
AHEA structure
View
AH*E*A4
7.0
UnbiasedAdaptiveCpHMD
AH_C7_E_C7_A structure
View
AHFA4
UnbiasedAdaptive
AHFA structure
View
AHGA4
UnbiasedAdaptive
AHGA structure
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AHHA4
UnbiasedAdaptive
AHHA structure
View
AH*H*A4
7.0
UnbiasedAdaptiveCpHMD
AH_C7_H_C7_A structure
View
AHIA4
UnbiasedAdaptive
AHIA structure
View
AHKA4
UnbiasedAdaptive
AHKA structure
View
AH*K*A4
7.0
UnbiasedAdaptiveCpHMD
AH_C7_K_C7_A structure
View
AHLA4
UnbiasedAdaptive
AHLA structure
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AHMA4
UnbiasedAdaptive
AHMA structure
View
AHNA4
UnbiasedAdaptive
AHNA structure
View
AHPA4
UnbiasedAdaptive
AHPA structure
View
AHQA4
UnbiasedAdaptive
AHQA structure
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AHRA4
UnbiasedAdaptive
AHRA structure
View
AH*R*A4
7.0
UnbiasedAdaptiveCpHMD
AH_C7_R_C7_A structure
View
AHSA4
UnbiasedAdaptive
AHSA structure
View
AHTA4
UnbiasedAdaptive
AHTA structure
View
AHVA4
UnbiasedAdaptive
AHVA structure
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AHWA4
UnbiasedAdaptive
AHWA structure
View
AHYA4
UnbiasedAdaptive
AHYA structure
View
AIHA4
UnbiasedAdaptive
AIHA structure
View
AKHA4
UnbiasedAdaptive
AKHA structure
View
AK*H*A4
7.0
UnbiasedAdaptiveCpHMD
AK_C7_H_C7_A structure
View
ALHA4
UnbiasedAdaptive
ALHA structure
View
AMHA4
UnbiasedAdaptive
AMHA structure
View
ANHA4
UnbiasedAdaptive
ANHA structure
View
APHA4
UnbiasedAdaptive
APHA structure
View
AQHA4
UnbiasedAdaptive
AQHA structure
View
ARHA4
UnbiasedAdaptive
ARHA structure
View
AR*H*A4
7.0
UnbiasedAdaptiveCpHMD
AR_C7_H_C7_A structure
View
ASHA4
UnbiasedAdaptive
ASHA structure
View
ATHA4
UnbiasedAdaptive
ATHA structure
View
AVHA4
UnbiasedAdaptive
AVHA structure
View
AWHA4
UnbiasedAdaptive
AWHA structure
View
AYHA4
UnbiasedAdaptive
AYHA structure
View